1 00:00:04,230 --> 00:00:11,049 [Music] 2 00:00:15,709 --> 00:00:13,490 okay so we're gonna shift gears a little 3 00:00:17,390 --> 00:00:15,719 bit here and so my project largely 4 00:00:20,090 --> 00:00:17,400 focuses on the evolution of 5 00:00:22,550 --> 00:00:20,100 multicellularity uh in bacteria 6 00:00:24,529 --> 00:00:22,560 specifically so titled here cellular 7 00:00:26,750 --> 00:00:24,539 differentiation within an obligate 8 00:00:28,189 --> 00:00:26,760 multicellular bacteria 9 00:00:29,570 --> 00:00:28,199 so where I like to start is just 10 00:00:32,210 --> 00:00:29,580 generally when we think about the 11 00:00:33,889 --> 00:00:32,220 evolution of life on Earth we can kind 12 00:00:38,030 --> 00:00:33,899 of think of it as an increase in 13 00:00:40,069 --> 00:00:38,040 complexity as as life continue to evolve 14 00:00:42,530 --> 00:00:40,079 and this is yes and over Simplicity but 15 00:00:44,150 --> 00:00:42,540 thinking of it as molecules coming 16 00:00:46,450 --> 00:00:44,160 together to form a first cell and 17 00:00:49,729 --> 00:00:46,460 eventually getting a multi-cellular 18 00:00:50,990 --> 00:00:49,739 organism and then some something that 19 00:00:53,150 --> 00:00:51,000 looks like the life that we have on 20 00:00:56,689 --> 00:00:53,160 Earth today 21 00:00:58,490 --> 00:00:56,699 if we look at our classic uh Tree of 22 00:01:00,049 --> 00:00:58,500 Life where we have different domains of 23 00:01:03,590 --> 00:01:00,059 the bacteria the archaea and the 24 00:01:05,270 --> 00:01:03,600 eukaryotes generally we tend to think of 25 00:01:07,969 --> 00:01:05,280 all the multicellular life forms 26 00:01:10,149 --> 00:01:07,979 belonging to the Eukarya and we think of 27 00:01:14,210 --> 00:01:10,159 the bacteria and archaea as these simple 28 00:01:18,830 --> 00:01:16,490 um if we look at uh the Tree of Life as 29 00:01:20,749 --> 00:01:18,840 we know it today uh multicellularity 30 00:01:23,870 --> 00:01:20,759 actually it can be plotted across the 31 00:01:27,410 --> 00:01:23,880 entire uh tree of life and so what I'm 32 00:01:29,270 --> 00:01:27,420 showing here is the aggregative uh 33 00:01:31,609 --> 00:01:29,280 evolution of multicellularity or a 34 00:01:33,830 --> 00:01:31,619 clonal uh evolution of multicellularity 35 00:01:35,870 --> 00:01:33,840 and we see it present in the bacteria 36 00:01:39,230 --> 00:01:35,880 the archaea and the Eukarya of course 37 00:01:41,630 --> 00:01:39,240 and so just focusing in on some bacteria 38 00:01:43,810 --> 00:01:41,640 that are capable of this these are just 39 00:01:46,190 --> 00:01:43,820 some micrographs showing different uh 40 00:01:49,249 --> 00:01:46,200 cyanobacteria that are in those chains 41 00:01:52,670 --> 00:01:49,259 up there in the upper left and then mixo 42 00:01:55,190 --> 00:01:52,680 Cox mixobacteria that sporolate an 43 00:01:58,010 --> 00:01:55,200 archaea called methanosarcina another 44 00:01:59,929 --> 00:01:58,020 example is this uh bacteria called cable 45 00:02:01,730 --> 00:01:59,939 bacteria that form these long centimeter 46 00:02:03,469 --> 00:02:01,740 long filaments and can actually move 47 00:02:05,870 --> 00:02:03,479 electrons along that 48 00:02:08,330 --> 00:02:05,880 so the organism that I study is called 49 00:02:09,830 --> 00:02:08,340 multicellular magnetotactic bacteria or 50 00:02:11,630 --> 00:02:09,840 MMB for short because I just don't want 51 00:02:13,670 --> 00:02:11,640 to say that the whole talk and so this 52 00:02:16,430 --> 00:02:13,680 is what they look like where we have a 53 00:02:18,589 --> 00:02:16,440 tem image sewing uh where these cells 54 00:02:22,070 --> 00:02:18,599 are grouped together in this kind of 55 00:02:23,449 --> 00:02:22,080 soccer ball shape or football shape 56 00:02:25,070 --> 00:02:23,459 um and then here in the lower half just 57 00:02:27,410 --> 00:02:25,080 an sem showing you what that structure 58 00:02:28,490 --> 00:02:27,420 looks like so I built a cartoon kind of 59 00:02:30,110 --> 00:02:28,500 showing 60 00:02:31,850 --> 00:02:30,120 um what this Ultra structure looks like 61 00:02:33,850 --> 00:02:31,860 and one of the things I want to point 62 00:02:36,650 --> 00:02:33,860 out that pertains the name is this 63 00:02:38,150 --> 00:02:36,660 magnetotaxis and so they make these uh 64 00:02:40,910 --> 00:02:38,160 organelles inside the cells called 65 00:02:43,309 --> 00:02:40,920 magnetosomes where they synthesize a 66 00:02:45,170 --> 00:02:43,319 Paramount or ferromagnetic mineral that 67 00:02:47,570 --> 00:02:45,180 allows them to sense Earth's geomagnetic 68 00:02:50,330 --> 00:02:47,580 poles and then they can taxi in the 69 00:02:52,729 --> 00:02:50,340 water column or the sediment column 70 00:02:55,130 --> 00:02:52,739 um they also have these carbon or energy 71 00:02:57,110 --> 00:02:55,140 storage granules inside them this 72 00:02:59,330 --> 00:02:57,120 acellular Center so it's just one layer 73 00:03:00,170 --> 00:02:59,340 of cells surrounding this acellular 74 00:03:02,150 --> 00:03:00,180 Center 75 00:03:04,070 --> 00:03:02,160 and then these actin like filaments that 76 00:03:07,610 --> 00:03:04,080 seem to have some something to do with 77 00:03:11,869 --> 00:03:09,470 um I've referred to them as obligate 78 00:03:13,670 --> 00:03:11,879 multicellular organisms and this is rare 79 00:03:16,130 --> 00:03:13,680 in bacteria in fact the only example 80 00:03:18,110 --> 00:03:16,140 where the hypothesized life cycle is 81 00:03:20,750 --> 00:03:18,120 that they grow in size and then the 82 00:03:23,869 --> 00:03:20,760 entire consortia divides and so we don't 83 00:03:26,630 --> 00:03:23,879 typically see this in uh bacteria where 84 00:03:29,750 --> 00:03:26,640 typically we see this this facultative 85 00:03:31,970 --> 00:03:29,760 multicellularity so they can be uh 86 00:03:33,710 --> 00:03:31,980 multicellular but they can also exist as 87 00:03:35,030 --> 00:03:33,720 a single cell and that's true for all 88 00:03:36,229 --> 00:03:35,040 the examples I showed you with the tree 89 00:03:38,570 --> 00:03:36,239 life 90 00:03:40,910 --> 00:03:38,580 so here's just an image of uh one of the 91 00:03:43,970 --> 00:03:40,920 MMB from my sample site and kind of what 92 00:03:46,369 --> 00:03:43,980 we think it looks like uh MMB dividing 93 00:03:49,070 --> 00:03:46,379 into possibly three 94 00:03:50,869 --> 00:03:49,080 I also mentioned moment of truth if the 95 00:03:55,970 --> 00:03:50,879 video works 96 00:03:58,490 --> 00:03:55,980 um that they're magnetactic oh let me 97 00:04:04,729 --> 00:03:58,500 see if I can get this to work 98 00:04:10,550 --> 00:04:07,869 Okay cool so what we have here is a uh 99 00:04:13,789 --> 00:04:10,560 tube with the MMB in the bottom of it 100 00:04:15,649 --> 00:04:13,799 and then a magnetic stir bar next to it 101 00:04:17,750 --> 00:04:15,659 and if you just watch it you can see 102 00:04:20,569 --> 00:04:17,760 them swim up out of the bottom of that 103 00:04:22,670 --> 00:04:20,579 tube and they taxi towards the the stir 104 00:04:23,990 --> 00:04:22,680 bar these ones are going towards the 105 00:04:27,290 --> 00:04:24,000 magnetic north 106 00:04:30,170 --> 00:04:27,300 here in on the right is a hanging water 107 00:04:33,590 --> 00:04:30,180 droplet just on a cover slip and there's 108 00:04:36,050 --> 00:04:33,600 a magnet uh to the right and then what 109 00:04:37,790 --> 00:04:36,060 I've done is just move that magnet turns 110 00:04:39,230 --> 00:04:37,800 around they start taxiing the in the 111 00:04:40,730 --> 00:04:39,240 opposite direction 112 00:04:43,129 --> 00:04:40,740 so that's uh just showing their 113 00:04:44,390 --> 00:04:43,139 magnetotaxis 114 00:04:46,249 --> 00:04:44,400 um it helps when we think of 115 00:04:47,570 --> 00:04:46,259 multicellularity to have some criteria 116 00:04:49,610 --> 00:04:47,580 for what that is 117 00:04:51,590 --> 00:04:49,620 and so just a list of these would be 118 00:04:53,749 --> 00:04:51,600 built from several cells of the same 119 00:04:55,850 --> 00:04:53,759 species a specific shape and 120 00:04:57,950 --> 00:04:55,860 organization and synchronized growth so 121 00:05:01,129 --> 00:04:57,960 that exclude things like cancer 122 00:05:03,290 --> 00:05:01,139 no competition between the cells 123 00:05:06,170 --> 00:05:03,300 coordinated behavior in response to 124 00:05:08,570 --> 00:05:06,180 external or internal stimuli existence 125 00:05:10,550 --> 00:05:08,580 of cell to cell signaling and then this 126 00:05:13,310 --> 00:05:10,560 last one that's kind of like the 127 00:05:15,850 --> 00:05:13,320 catch-all metabolic differentiation or a 128 00:05:18,890 --> 00:05:15,860 division of labor so with my organism 129 00:05:21,110 --> 00:05:18,900 they fit these first four and these 130 00:05:23,570 --> 00:05:21,120 second the last two are what we're kind 131 00:05:25,249 --> 00:05:23,580 of looking into 132 00:05:27,830 --> 00:05:25,259 um one of the things we found with our 133 00:05:30,469 --> 00:05:27,840 project was that the these MMB are not 134 00:05:33,290 --> 00:05:30,479 actually clonal and how we did this was 135 00:05:35,450 --> 00:05:33,300 we sorted whole consortia's 136 00:05:37,249 --> 00:05:35,460 did multiple displacement amplifications 137 00:05:39,050 --> 00:05:37,259 so we Amplified their entire genome and 138 00:05:41,210 --> 00:05:39,060 sequenced that and we were able to map 139 00:05:43,189 --> 00:05:41,220 reads to the longest read the best 140 00:05:46,189 --> 00:05:43,199 assembly there and look at these single 141 00:05:48,770 --> 00:05:46,199 nucleotide polymorphism differences 142 00:05:50,510 --> 00:05:48,780 and what we found was that they have 143 00:05:52,430 --> 00:05:50,520 compared to controls which is a 144 00:05:54,770 --> 00:05:52,440 pseudomonas control as well as other 145 00:05:56,150 --> 00:05:54,780 environmental cosorts they have this 146 00:05:58,850 --> 00:05:56,160 much higher 147 00:06:00,350 --> 00:05:58,860 um single nucleotide polymorphism rate 148 00:06:02,990 --> 00:06:00,360 than than what we see with other 149 00:06:04,610 --> 00:06:03,000 organisms which was kind of a surprise 150 00:06:06,050 --> 00:06:04,620 and we're still scratching our heads 151 00:06:08,029 --> 00:06:06,060 about this 152 00:06:10,670 --> 00:06:08,039 um and that equates to 20 to 100 153 00:06:12,230 --> 00:06:10,680 nucleotide polymorphisms in the genome 154 00:06:14,990 --> 00:06:12,240 and their genomes are about eight 155 00:06:16,670 --> 00:06:15,000 megabases which is about double that of 156 00:06:18,770 --> 00:06:16,680 E coli 157 00:06:20,450 --> 00:06:18,780 another thing that we looked into was 158 00:06:22,790 --> 00:06:20,460 this metabolic differentiation or this 159 00:06:24,890 --> 00:06:22,800 division of labor and this was done by 160 00:06:26,450 --> 00:06:24,900 doing stable isotope incubations where 161 00:06:29,770 --> 00:06:26,460 we incubated them in the presence of 162 00:06:33,070 --> 00:06:29,780 these 13c or deuterium oxide 163 00:06:35,809 --> 00:06:33,080 chemicals and then we use uh 164 00:06:39,830 --> 00:06:35,819 nanosecondary ion Mass spectroscopy to 165 00:06:42,050 --> 00:06:39,840 look at those and map that back where we 166 00:06:44,510 --> 00:06:42,060 found in the lower left whereas the 13c 167 00:06:46,610 --> 00:06:44,520 image differences in the use of that 168 00:06:49,490 --> 00:06:46,620 substrate indicating this the vision of 169 00:06:52,430 --> 00:06:49,500 Labor that we suspected 170 00:06:54,350 --> 00:06:52,440 so with that just to kind of give 171 00:06:56,090 --> 00:06:54,360 conclusions and takeaways 172 00:06:58,309 --> 00:06:56,100 um the m and b are the only known 173 00:07:00,409 --> 00:06:58,319 obligate multidocellular bacteria that 174 00:07:02,090 --> 00:07:00,419 we know of yet 175 00:07:05,210 --> 00:07:02,100 um they are not clonal and do not 176 00:07:08,270 --> 00:07:05,220 conform to these canonical ideas of what 177 00:07:09,590 --> 00:07:08,280 multicellular multicellularity is where 178 00:07:10,490 --> 00:07:09,600 we typically have this clonal 179 00:07:13,010 --> 00:07:10,500 development 180 00:07:15,290 --> 00:07:13,020 from where one cell divides into 181 00:07:17,689 --> 00:07:15,300 daughter cells that stick together or 182 00:07:18,650 --> 00:07:17,699 this aggregative multicellularity and 183 00:07:21,170 --> 00:07:18,660 they seem to 184 00:07:23,570 --> 00:07:21,180 fall somewhere in the middle there 185 00:07:25,790 --> 00:07:23,580 they also engage in a division of labor 186 00:07:27,409 --> 00:07:25,800 as we were looking at with the metabolic 187 00:07:29,270 --> 00:07:27,419 differentiation 188 00:07:30,589 --> 00:07:29,280 and then of course just to think the lab 189 00:07:31,900 --> 00:07:30,599 and all the collaborators that help us 190 00:07:32,160 --> 00:07:31,910 with that thank you 191 00:07:37,500 --> 00:07:32,170 [Applause]